CDS

Accession Number TCMCG057C58255
gbkey CDS
Protein Id XP_018464519.1
Location join(536..550,762..854,976..1027,1141..1272,1351..1754,1824..2110,2193..2388,2468..2674,2751..2918,2989..3279,3362..3492,3580..3643)
Gene LOC108835797
GeneID 108835797
Organism Raphanus sativus

Protein

Length 679aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018609017.1
Definition PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description ATP-dependent DNA helicase 2 subunit
KEGG_TC -
KEGG_Module M00297        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10885        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03450        [VIEW IN KEGG]
map03450        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0000726        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0000784        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015074        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042162        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCGTAATCGGGAGGGTTTGGTTTTGTTGGTGGATGTAGGCCCGGCTATGCATAGTGTACTCCCTGATGTTGAAAAGACATGTTCTTTGCTTATGCAAAAGAAGTTGATTTACAACAAGTTTGATGAAGTTGGAATCATTGTCTTTGGAACTCAAGAAACCGAAAATGAGCTTGCTAGGGACATAGGTGGATATGACAACATTTGGGTTTTAAGGAACATCAAAGTTGTTGATGAACTCGTGATTGATCGTGTAAAGCAGCTCCCTCGAGGAACTGTAGCTGGCGACTTTCTTGATGCTTTGATTGTTGGGATGGATATGCTTATAAAGACGTACGGTACTGGACAAAGAGGGAAAAAACGGTTGTGTCTCATCACCAATGCAGCTTGTCCTACCAAAGATCCATTTGAAGGGACCAAAGATGAGCAAGTCAGTACCATTGCTGCCAAAATGGCTGCAGAGGGTATAAAGATGGAAAGCATTGTTATGAAAGCTGATCCTAGCGTTGGTGTTGATGAGAAGATAATAGAGGAGAATGATCATTTGTTGAGTTTACTCTCCACCAACGCCATTGCGAAAACAGTGTATGTAGAGAGTCCACTCTCGCTGCTAGGCTCTTTAAAGACCCGGAGAGTTGCTCCTGTTACTCTGTTCAGAGGCGACCTTGAGATTAACCCATCAATGAAGATCAAGGTGTGGGTTTATAAGAAAGTGGCTGAAGAGAGACTTCCCTCGCTAAAAATGTACTCTGACAAGGCGCCACCTAGTGACAAGTTTGCTAAACATGAAGTGAATATCGATTACGATTATAAAGTTAACGAAGAAACTAGTGAGGCTCTTGCTCCAGAAGAAAGGATCAAGGGCTTTCGCTATGGACCTCATGTCATTCCTATCTCGCCGGATGAGATGGAAACACTCAAGTTCAAAACTGAAAAGGGCATGAAGCTTCTTGGATTCACTGATGCATCAAACATACTCAGACATTATTACATGAAAGACGTGAACATTGTTGTTCCGGACCCGAGCAAAGAAAAATCTGTGATTGCAGTCTCTGCCATTGCAAGAGAGATGAAGCAAACAAACAAGGTGGCAATCGTACGTTGTGTCTGGAGAAACGGACAAGGGAATGTAGTTGTTGGAGTCCTCACTCCAAATGTGTCTGAACGAGATGACACCCCTGATTCTTTCTACTTCAACGTGCTGCCATTCGCCGAGGATATCCGCGAGTTTCCATTTCCTTCTTTCAGTAGATTACCTGCGTCGTGGAAGCCTGATGAGCAACAGCAAGCAGTGGCTGATAACTTGGTTGAGATGCTTGACCTTGCACCTTCTCCTAAAGAGGAAGTGTTAAAGCCTGAGCTTACTCCTAACCCAGTTCTGCAGCGCTTTTATGAATACCTTGAGTTGAAATCAAGATCTACCGATGCTGCTTTACCTCCAATGGATGAAGCTTTCAAGAGAATCATGGAGCAGGATCCAGAACTCTCTTCCAACACCAAATCCATAATGGATACGTTTCGTGGAAGTTTTGAAGTGAAGGAGAACCCAAAGTTGAGAAAGGCTTCTAAGAGAATGTTACGGGATAAGCCATCTGGTTCAGATGATGAAGACAATCGCATGATTACTTATAATGCCAATGAGAACAATGTTGACACAGTGGGAGATGCAAACCCGGTTCAAGATTTTGAAGCTATGATATCGCGTAGAGATGGCAATGATTGGGTCAATAAAGCAATCAGTGAGATGAAGAAACGAGTAGTGAAGCTCGTGGAAGATAGTAGTACCACTGATAAAGCATTGGAATGTTTGCTCGCTTTACGTAAAGCCTGCGTCTTGGAACAGGAGCCGAAGCAGTTCAATGAGTTCTTGAATCATCTACACGAGTTATGCCAGGAAAGGAAGTTGTCTCATTTTCTTGAACATTTCGCGTCGAAGAAGATCACGTTGATTCCAAAATCAGAAGCAGCAGATAGTGATGTGGCGGACGAGAAGGCTGGGGATTTCACTGTCAAAGAAGAGCCAAAGCTCGAGAGCTAA
Protein:  
MARNREGLVLLVDVGPAMHSVLPDVEKTCSLLMQKKLIYNKFDEVGIIVFGTQETENELARDIGGYDNIWVLRNIKVVDELVIDRVKQLPRGTVAGDFLDALIVGMDMLIKTYGTGQRGKKRLCLITNAACPTKDPFEGTKDEQVSTIAAKMAAEGIKMESIVMKADPSVGVDEKIIEENDHLLSLLSTNAIAKTVYVESPLSLLGSLKTRRVAPVTLFRGDLEINPSMKIKVWVYKKVAEERLPSLKMYSDKAPPSDKFAKHEVNIDYDYKVNEETSEALAPEERIKGFRYGPHVIPISPDEMETLKFKTEKGMKLLGFTDASNILRHYYMKDVNIVVPDPSKEKSVIAVSAIAREMKQTNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDIREFPFPSFSRLPASWKPDEQQQAVADNLVEMLDLAPSPKEEVLKPELTPNPVLQRFYEYLELKSRSTDAALPPMDEAFKRIMEQDPELSSNTKSIMDTFRGSFEVKENPKLRKASKRMLRDKPSGSDDEDNRMITYNANENNVDTVGDANPVQDFEAMISRRDGNDWVNKAISEMKKRVVKLVEDSSTTDKALECLLALRKACVLEQEPKQFNEFLNHLHELCQERKLSHFLEHFASKKITLIPKSEAADSDVADEKAGDFTVKEEPKLES